Integrative Approach to Fungal Infections and Bioprospecting for Drug Discovery: Two Volume Set

Volume 1

Preface

List of Contributors

Editor Bios

Part 1: Medicinal Plants, Antifungals and Metagenomics

Chapter 01: Fungal Infections: An Emerging Global Threat to Human Health, Current Trends and Challenges

Ananya Chamola, Garima Singh, Jitendra Singh Rathore and Chaitali Ghosh

Chapter 02: Medicinal Plants and Their Antifungal Potential: Ancient Knowledge and Modern Science

Seema Raj, Manoj Kumar and Nidhee Chaudhary

Chapter 03: Antimicrobial Peptides from Medicinal Plants: New Frontiers in Management of Multidrug Resistance Fungus

Pesaru Sai Laya, Pisal Ketali Prakash, Priya Prasad

Chapter 04 Microbial Allies: The Role of Endophytes in the Production of Antifungal Compounds

R. Nischitha

Chapter 05: Study of Deep Learning and Bioprospecting for Black Fungus Identification and Treatment

Yakshit Arora, Harsh Lalwani, Ritesh Pandey, Navaneet Chaturvedi

Part 2: Comprehending Pathobiology of Fungus

Chapter 06: Genetic and Molecular Mechanisms Driving Antifungal Resistance in Emerging Fungal Species

Shumaiza Asif, Ashik Francis, Ijabani Immanuel, Anil Thakur

Chapter 07: Deciphering the Role of Biofilm in Fungal Pathogenesis

Tushar Bandhu1 Patel Manish Chandrashekhar Kumar, Himanshi Bihaniya, Chaitanya Ullas Gatkal, Garima Gangwar, Anil Thakur

Chapter 08: Metagenomic Perspectives on the Human Gut Ecosystem and Disease Associations

Bablu Kumar, Ashwinipriyadarshini Megur, Nishtha Kaushik, Shweta Singh

Index

Volume 2

Preface
List of Contributors
Editor Bios

Part 1: Medicinal Plants Bioprospecting and Advance Bioprocessing Techniques

Chapter 01: Downstream Processing of Fermentation Media: Extracting and Purifying Antifungal Compounds
Pulakeswar Basumatary, Dharitri Saikia, Manash Pratim Talukdar, Emon Kalyan, Utpal Bora

Chapter 02: Bioprocess Optimization for Antifungal Compounds: Quality Control, Technological Innovations, and Bioreactor Design
Ambika Pati Deori, Megha Rasaily, Krishna Das, Rahul Kumar Thaosen, Priyanuj Sengupta. Ranjan Tamuli

Chapter 03: Mathematical Modeling and Computational Tools for Fermentation Process Optimization
Sai Bhavani Gottumukkala, Anbumathi Palanisamy

Part 2: Integrative Approaches and Future Applications

Chapter 04: Advances in Biotechnology for Enhancing Antimicrobial Production from Medicinal Plants
Shivam Chauhan, Nikky Deepa, Jiya Chanotiya, Rahul Kumar Gupta, Shubhra Chaturvedi, Pallavi Yadav, Akanksha Singh

Chapter 05: Nanotechnology in Antifungal Therapeutics: Innovations in Drug Development and Targeted Delivery
Rusmita Buragohain, Jibanjyoti Panda, Bishwambhar Mishra, Debasis Nayak, Yugal Kishore Mohanta

Chapter 06: Integrating Metagenomics with Bioprocessing for Antifungal Plant-Based Drugs: From Lab to Market
Vidyasagar, Mayank Gangwar, Meenakshi Singh, Sudhir Kumar Singh

Chapter 07: Regulatory and Legal Frameworks in Bioprospecting and Application of Medicinal Plant-Derived Antifungal Agents
Aditi Deshpande, Sindhu Bali, Anand Kumar Shukla, Tulika Marial, Narendra Kadoo

Index

Biography

Dr. Eti Sharma, is currently working as Assistant Professor at the School of Biotechnology, Gautam Buddha University, Greater Noida, India. She holds a Ph.D. in Molecular Biology and Biotechnology from G.B. Pant University of Agriculture & Technology, Pantnagar, India. She has been awarded several prestigious fellowships from reputed organizations in India. Dr Sharma  has established herself in the field of bioprospecting and metabolomics of medicinal plants. She has expertise in medicinal plant research, biofabrication, and plant-microbe interactions. Her current research focuses on exploring the role of plant-associated microbiomes in the production of pharmaceutically significant bioactive compounds. She has completed two edited book proposals, with more currently in progress. Additionally, she has authored numerous research papers in nationally and internationally reputed journals, along with many book chapters.

Dr Rekha Puria is working as Assistant Professor and Head of the Department, School of Biotechnology, Gautam Buddha University, Greater Noida, India. She finished her Post doctorate from Duke University Medical Centre, USA and Doctorate from Institute of Microbial Technology (IMTECH), India. She has 15 plus years of experience in yeast genetics and genomics. She is proficient in genetic manipulation techniques and genome scale expression profiling through microarrays and transcriptomics. She extensively uses Saccharomyces as model to understand the concepts of cellular growth and proliferation regulated through both coding and noncoding transcripts. Her research work has added in current understanding of role of TOR signaling pathway in cell growth under stress conditions. Currently her interest is in understanding growth, pathogenesis and drug tolerance of Candida auris and identification of novel antifungals against Candida. Her research is sponsored by several Grants from Govt of India. Her work has been published in number of international journals of high impact factor. In addition, she has authored several book chapters.

Dr. Karan Kumar is a Postdoctoral Research Associate in The Blank Lab (Industrial Systems Biotechnology, iAMB) at RWTH Aachen University, working on the EIC Pathfinder project HYDROCOW. His current research integrates pangenome-guided genome-scale metabolic models, DBTL experimentation, and machine-learning–assisted design to engineer Xanthobacter sp. SoF1 for “food-from-air” protein production from CO₂/H₂, in collaboration with Solar Foods, FGen/Ginkgo Bioworks, and the University of Groningen. Karan earned his Ph.D. in Energy Science & Engineering from Indian Institute of Technology (IIT) Guwahati as a Prime Minister’s Research Fellow (2018–2023), where he combined clostridial ABE fermentation on lignocellulosic hydrolysates with comparative/pangenomics, GEMs (FBA/FVA), omics integration, DoE-driven bioprocess optimization, and sono-enzymatic upgrading to n-butyl levulinate. His dissertation was recognized with the institute’s Best PhD Thesis Award (2024). He has authored over 13 peer-reviewed journal articles and 10 book chapters in leading international publications. His publication record spans leading venues, including two first-author articles in Process Safety and Environmental Protection, and additional publications in Biotechnology & Bioengineering, Biomass Conversion & Biorefinery, and Process Biochemistry. He also co-authored papers in Algal Research and Energy Conversion and Management, and contributed invited chapters to volumes published by Springer and CRC Press in 2024. Collectively, his contributions cover the domains of biofuel process intensification, metabolic modeling, and computational bioprocess engineering. Since joining RWTH, he has co-authored an invited review in press in Trends in Biotechnology on gas precision fermentation with hydrogen-oxidizing bacteria, and a 2025 review in Renewable and Sustainable Energy Reviews on fourth-generation biodiesel, reflecting his broadened systems-biotechnology agenda in Aachen. He led Winter/Virtual Internships in bioinformatics and mathematical biology that trained 30+ students and yielded a preprint, journal papers, book chapters, and student awards. He has been proactive in disseminating his research. He delivered oral presentations at Clostridia XVI (INSA Toulouse, 2022), VII-SEEC (2022), VI-SEEC (2021), and AOSS-4 (2019); presented an e-poster at ISMB 2022; and gave a 3-Minute Thesis talk at RIC 2022. His talks received multiple accolades, including the Best Paper Award (VII-SEEC 2022), Springer Best Paper Award (NERC-2022), and Best Oral Presentation (BREEECH-2021). He also secured competitive travel grants from PMRF, DBT-CTEP, and SERB-ITS (Young Scientist).